Transcript: lnc-GRHL2-4:1

Basic information

LNCipedia transcript ID: lnc-GRHL2-4:1 
LNCipedia gene ID: lnc-GRHL2-4
Location (hg38): chr8:101984432-101994677
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2350 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000509445
Alternative gene names: ENSG00000251530; AP001206.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.9559 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRHL2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRHL2-3:1
3.1 lnc-GRHL2-4:1
4.0 lnc-GRHL2-4:1
4.1 lnc-GRHL2-4:1
5.0 lnc-GRHL2-4:1
5.1 lnc-CA2-185:1
5.2 lnc-GRHL2-4:1