Transcript: lnc-GRIK2-2:12

Basic information

LNCipedia transcript ID: lnc-GRIK2-2:12 
LNCipedia gene ID: lnc-GRIK2-2
Location (hg38): chr6:100889603-100890338
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 736 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT114165
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.3233 non-coding 
CPAT coding probability 35.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRIK2-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRIK2-5:2
4.0 lnc-GRIK2-5:2
4.1 lnc-GRIK2-2:12
5.0 lnc-GRIK2-2:12
5.1 lnc-SMPD2-80:12
5.2 lnc-GRIK2-2:12