Transcript: lnc-GRIK2-2:13

Basic information

LNCipedia transcript ID: lnc-GRIK2-2:13 
LNCipedia gene ID: lnc-GRIK2-2
Location (hg38): chr6:100962705-100963156
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 345 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011906; NONHSAT114168
Alternative gene names: XLOC_005405; linc-GRIK2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.4671 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRIK2-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRIK2-1:1
3.1 lnc-GRIK2-1:1
4.0 lnc-GRIK2-1:1
4.1 lnc-GRIK2-2:13
5.0 lnc-GRIK2-2:13
5.1 lnc-SMPD2-80:13
5.2 lnc-GRIK2-2:13