Transcript: lnc-GRIK2-2:3

Basic information

LNCipedia transcript ID: lnc-GRIK2-2:3 
LNCipedia gene ID: lnc-GRIK2-2
Location (hg38): chr6:100881397-100883081
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1685 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1171:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.6921 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRIK2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GRIK2-2:3
4.1 lnc-GRIK2-2:3
5.0 lnc-GRIK2-2:3
5.1 lnc-SMPD2-80:1
5.2 lnc-GRIK2-2:3