Transcript: lnc-GRP-2:1

Basic information

LNCipedia transcript ID: lnc-GRP-2:1 
LNCipedia gene ID: lnc-GRP-2
Ensembl Gene ID: ENSG00000267677
Ensembl Transcript ID: ENST00000591331
Location (hg38): chr18:59360700-59386749
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 417 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059559; ENST00000591331.1
Alternative gene names: ENSG00000267677.1; RP11-27G24.1; AC016229.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.6946 non-coding 
CPAT coding probability 4.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRP-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRP-2:1
4.0 lnc-GRP-2:1
4.1 lnc-GRP-2:1
5.0 lnc-GRP-2:1
5.1 lnc-WDR7-39:1
5.2 lnc-GRP-2:1