Transcript: lnc-GRXCR1-3:5

Basic information

LNCipedia transcript ID: lnc-GRXCR1-3:5 
LNCipedia gene ID: lnc-GRXCR1-3
Location (hg38): chr4:42657523-42657928
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 406 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260519.1|ENST00000562054.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -250.5422 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRXCR1-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GRXCR1-3:5
5.0 lnc-GRXCR1-3:5
5.1 lnc-GABRB1-22:3
5.2 lnc-GRXCR1-3:5