Transcript: lnc-GSTM2-1:2

Basic information

LNCipedia transcript ID: lnc-GSTM2-1:2 
LNCipedia gene ID: lnc-GSTM2-1
Location (hg38): chr1:109725743-109736978
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 365 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA40:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.8893 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GSTM2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GSTM5-1:5
4.1 lnc-GSTM5-1:5
5.0 lnc-GSTM5-1:5
5.1 lnc-CSF1-7:1
5.2 lnc-GSTM2-1:2