Transcript: lnc-GTDC1-27:1

Basic information

LNCipedia transcript ID: lnc-GTDC1-27:1 
LNCipedia gene ID: lnc-GTDC1-27
Location (hg38): chr2:143667610-143903644
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9099 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257277.1|MICT00000200416.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.0312 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTDC1-27:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GTDC1-2:3
5.0 lnc-GTDC1-2:3
5.1 lnc-MMADHC-91:1
5.2 lnc-GTDC1-27:1