Transcript: lnc-GTF2A1-78:2

Basic information

LNCipedia transcript ID: lnc-GTF2A1-78:2 
LNCipedia gene ID: lnc-GTF2A1-78
Ensembl Gene ID: ENSG00000284959
Ensembl Transcript ID: ENST00000646928
Location (hg38): chr14:81049426-81170414
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5577 bp
Exons: 8
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646928.1
Alternative gene names: ENSG00000284959.1; AC007262.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.9023 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTF2A1-78:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PROX2-78:2
5.1 lnc-PROX2-78:2
5.2 lnc-GTF2A1-78:2