Transcript: lnc-GTF2A1-78:3

Basic information

LNCipedia transcript ID: lnc-GTF2A1-78:3 
LNCipedia gene ID: lnc-GTF2A1-78
Ensembl Gene ID: ENSG00000284959
Ensembl Transcript ID: ENST00000646052
Location (hg38): chr14:81012099-81170224
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3325 bp
Exons: 8
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646052.1
Alternative gene names: ENSG00000284959.1; AC007262.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.325 non-coding 
CPAT coding probability 53.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GTF2A1-78:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PROX2-78:3
5.1 lnc-PROX2-78:3
5.2 lnc-GTF2A1-78:3