Transcript: lnc-GTF2F2-13:1

Basic information

LNCipedia transcript ID: lnc-GTF2F2-13:1 
LNCipedia gene ID: lnc-GTF2F2-13
RefSeq ID: NR_120424
Location (hg38): chr13:45106279-45113206
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1762 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120424; NR_120424.1
Alternative gene names: LOC101929259


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.7653 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTF2F2-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTF2F2-13:1
4.0 lnc-GTF2F2-13:1
4.1 lnc-GTF2F2-13:1
5.0 lnc-GTF2F2-13:1
5.1 lnc-KL-124:1
5.2 lnc-GTF2F2-13:1