Transcript: lnc-GTPBP4-3:6

Basic information

LNCipedia transcript ID: lnc-GTPBP4-3:6 
LNCipedia gene ID: lnc-GTPBP4-3
Location (hg38): chr10:931994-942641
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10648 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229869.1|ENCT00000042817.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 155.6047 coding 
CPAT coding probability 82.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GTPBP4-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GTPBP4-3:6
5.0 lnc-GTPBP4-3:6
5.1 lnc-NPY4R2-551:2
5.2 lnc-GTPBP4-3:6