Transcript: lnc-GTPBP4-5:1

Basic information

LNCipedia transcript ID: lnc-GTPBP4-5:1 
LNCipedia gene ID: lnc-GTPBP4-5
Location (hg38): chr10:1090155-1092179
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2025 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT010899
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.5633 non-coding 
CPAT coding probability 13.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTPBP4-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTPBP4-5:1
4.0 lnc-GTPBP4-5:1
4.1 lnc-GTPBP4-5:1
5.0 lnc-GTPBP4-5:1
5.1 lnc-NPY4R2-549:1
5.2 lnc-GTPBP4-5:1