Transcript: lnc-GUCD1-1:1

Basic information

LNCipedia transcript ID: lnc-GUCD1-1:1 
LNCipedia gene ID: lnc-GUCD1-1
Location (hg38): chr22:24388648-24402659
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5824 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058311.1|MICT00000230981.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.8464 non-coding 
CPAT coding probability 10.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GUCD1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C22orf45-2:1
5.0 lnc-C22orf45-2:1
5.1 lnc-PITPNB-78:1
5.2 lnc-GUCD1-1:1