Transcript: lnc-GUCY1A1-3:3

Basic information

LNCipedia transcript ID: lnc-GUCY1A1-3:3 
LNCipedia gene ID: lnc-GUCY1A1-3
Location (hg38): chr4:155443606-155447624
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 272 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008302; NONHSAT098916
Alternative gene names: XLOC_003749; linc-GUCY1A3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.2439 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GUCY1A1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GUCY1A3-2:2
3.1 lnc-GUCY1A3-3:2
4.0 lnc-GUCY1A3-3:2
4.1 lnc-GUCY1A3-3:2
5.0 lnc-GUCY1A3-3:2
5.1 lnc-NPY2R-3:3
5.2 lnc-GUCY1A1-3:3