Transcript: lnc-GVQW2-1:1

Basic information

LNCipedia transcript ID: lnc-GVQW2-1:1 
LNCipedia gene ID: lnc-GVQW2-1
Location (hg38): chr6:138724965-138773671
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 10250 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000090200.1|ENCT00000391816.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.1683 non-coding 
CPAT coding probability 16.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GVQW2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NHSL1-1:5
5.0 lnc-NHSL1-1:5
5.1 lnc-OLIG3-33:1
5.2 lnc-GVQW2-1:1