Transcript: lnc-GVQW2-1:2

Basic information

LNCipedia transcript ID: lnc-GVQW2-1:2 
LNCipedia gene ID: lnc-GVQW2-1
Location (hg38): chr6:138724965-138773671
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 8726 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000090200.1|ENCT00000391818.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.419 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GVQW2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NHSL1-1:6
5.0 lnc-NHSL1-1:6
5.1 lnc-OLIG3-33:2
5.2 lnc-GVQW2-1:2