Transcript: lnc-GVQW2-1:8

Basic information

LNCipedia transcript ID: lnc-GVQW2-1:8 
LNCipedia gene ID: lnc-GVQW2-1
Location (hg38): chr6:138751799-138752506
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 260 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT115221; FPKM1_group_28561_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.0161 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GVQW2-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NHSL1-4:1
4.0 lnc-NHSL1-5:1
4.1 lnc-NHSL1-1:8
5.0 lnc-NHSL1-1:8
5.1 lnc-OLIG3-33:8
5.2 lnc-GVQW2-1:8