Transcript: lnc-H3F3A-2:5

Basic information

LNCipedia transcript ID: lnc-H3F3A-2:5 
LNCipedia gene ID: lnc-H3F3A-2
Location (hg38): chr1:226122067-226126606
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3155 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000037593.1|MICT00000031804.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.2821 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-H3F3A-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MIXL1-2:6
5.0 lnc-MIXL1-2:6
5.1 lnc-ZNF678-77:5
5.2 lnc-H3F3A-2:5