Transcript: lnc-HAAO-6:2

Basic information

LNCipedia transcript ID: lnc-HAAO-6:2 
LNCipedia gene ID: lnc-HAAO-6
Location (hg38): chr2:42950642-42955974
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1335 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1821_chr2:43177781-43183114_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.9799 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAAO-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAAO-6:2
4.0 lnc-HAAO-6:2
4.1 lnc-HAAO-6:2
5.0 lnc-HAAO-6:2
5.1 lnc-MAP4K3-79:2
5.2 lnc-HAAO-6:2