Transcript: lnc-HAAO-7:13

Basic information

LNCipedia transcript ID: lnc-HAAO-7:13 
LNCipedia gene ID: lnc-HAAO-7
Location (hg38): chr2:42972398-43001464
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 942 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004225; NONHSAT147083
Alternative gene names: XLOC_002067; linc-HAAO-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.6657 non-coding 
CPAT coding probability 7.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAAO-7:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-THADA-4:3
3.1 lnc-THADA-4:3
4.0 lnc-THADA-4:3
4.1 lnc-THADA-4:3
5.0 lnc-THADA-4:3
5.1 lnc-ATP6V1E2-41:13
5.2 lnc-HAAO-7:13