Transcript: lnc-HAO2-2:15

Basic information

LNCipedia transcript ID: lnc-HAO2-2:15 
LNCipedia gene ID: lnc-HAO2-2
Location (hg38): chr1:119261942-119263083
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1142 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT005548; FPKM1_group_1338_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.6456 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAO2-2:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAO2-2:15
4.0 lnc-HAO2-2:15
4.1 lnc-HAO2-2:15
5.0 lnc-HAO2-2:15
5.1 lnc-HAO2-2:15
5.2 lnc-HAO2-2:15