Transcript: lnc-HAO2-2:31

Basic information

LNCipedia transcript ID: lnc-HAO2-2:31 
LNCipedia gene ID: lnc-HAO2-2
Location (hg38): chr1:119140771-119184642
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6815 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231365.1|MICT00000018362.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 86.144 coding 
CPAT coding probability 6.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HAO2-2:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HAO2-2:31
5.0 lnc-HAO2-2:31
5.1 lnc-HAO2-2:31
5.2 lnc-HAO2-2:31