Transcript: lnc-HAO2-2:7

Basic information

LNCipedia transcript ID: lnc-HAO2-2:7 
LNCipedia gene ID: lnc-HAO2-2
Location (hg38): chr1:119262924-119275770
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 604 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00001129
Alternative gene names: XLOC_000369; linc-HAO2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.9715 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAO2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HAO2-2:1
3.1 lnc-HAO2-2:7
4.0 lnc-HAO2-2:7
4.1 lnc-HAO2-2:7
5.0 lnc-HAO2-2:7
5.1 lnc-HAO2-2:7
5.2 lnc-HAO2-2:7