Transcript: lnc-HDAC2-4:11

Basic information

LNCipedia transcript ID: lnc-HDAC2-4:11 
LNCipedia gene ID: lnc-HDAC2-4
Location (hg38): chr6:113345775-113376380
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1290 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000089639.1|MICT00000309898.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -126.663 non-coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HDAC2-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HDAC2-4:11
5.0 lnc-HDAC2-4:11
5.1 lnc-HDAC2-4:11
5.2 lnc-HDAC2-4:11