Transcript: lnc-HDAC2-4:7

Basic information

LNCipedia transcript ID: lnc-HDAC2-4:7 
LNCipedia gene ID: lnc-HDAC2-4
Location (hg38): chr6:113357003-113376459
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 989 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000089639.1|ENCT00000389921.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.858 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HDAC2-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HDAC2-4:7
5.0 lnc-HDAC2-4:7
5.1 lnc-HDAC2-4:7
5.2 lnc-HDAC2-4:7