Transcript: lnc-HDDC2-5:5

Basic information

LNCipedia transcript ID: lnc-HDDC2-5:5 
LNCipedia gene ID: lnc-HDDC2-5
Location (hg38): chr6:125718242-125749190
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2629 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT114808
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.0574 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HDDC2-5:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HDDC2-5:5
4.0 lnc-HDDC2-5:5
4.1 lnc-HDDC2-5:5
5.0 lnc-HDDC2-5:5
5.1 lnc-HDDC2-5:5
5.2 lnc-HDDC2-5:5