Transcript: lnc-HDGFL2-5:1

Basic information

LNCipedia transcript ID: lnc-HDGFL2-5:1 
LNCipedia gene ID: lnc-HDGFL2-5
Location (hg38): chr19:4545195-4545451
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 257 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT060623
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.3567 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HDGFL2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC011498.1-5:1
4.0 lnc-AC011498.1-5:1
4.1 lnc-AC011498.1-5:1
5.0 lnc-AC011498.1-5:1
5.1 lnc-RPL36-39:1
5.2 lnc-HDGFL2-5:1