Transcript: lnc-HELZ-2:1

Basic information

LNCipedia transcript ID: lnc-HELZ-2:1 
LNCipedia gene ID: lnc-HELZ-2
Ensembl Gene ID: ENSG00000265664
Ensembl Transcript ID: ENST00000579138
Location (hg38): chr17:67032409-67033290
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 229 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579138.1; RP11-74H8.1-001; OTTHUMT00000447038.1; NONHSAT055403
Alternative gene names: ENSG00000265664.1; RP11-74H8.1; OTTHUMG00000179552.1; AC005544.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.2455 non-coding 
CPAT coding probability 5.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HELZ-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HELZ-2:1
4.0 lnc-HELZ-2:1
4.1 lnc-HELZ-2:1
5.0 lnc-HELZ-2:1
5.1 lnc-CYB561-77:1
5.2 lnc-HELZ-2:1