Transcript: lnc-HEPACAM-2:6

Basic information

LNCipedia transcript ID: lnc-HEPACAM-2:6 
LNCipedia gene ID: lnc-HEPACAM-2
Location (hg38): chr11:124949163-124953991
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2556 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000007328.1|MICT00000069605.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.4606 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HEPACAM-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HEPACAM-2:6
5.0 lnc-HEPACAM-2:6
5.1 lnc-ADAMTS8-61:5
5.2 lnc-HEPACAM-2:6