Transcript: lnc-HERC3-14:2

Basic information

LNCipedia transcript ID: lnc-HERC3-14:2 
LNCipedia gene ID: lnc-HERC3-14
Location (hg38): chr4:88709997-88722428
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 714 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT097374
Alternative gene names: NCRNA00039


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.6309 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HERC3-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HERC3-1:4
4.0 FAM13A-AS1:3
4.1 FAM13A-AS1:3
5.0 FAM13A-AS1:3
5.1 lnc-HERC3-13:2
5.2 lnc-HERC3-14:2