Transcript: lnc-HERC5-1:1

Basic information

LNCipedia transcript ID: lnc-HERC5-1:1 
LNCipedia gene ID: lnc-HERC5-1
Ensembl Gene ID: ENSG00000285122
Ensembl Transcript ID: ENST00000598772
Location (hg38): chr4:88523826-88524983
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 326 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT097364; ENST00000598772.1
Alternative gene names: ENSG00000285122.1; AC083829.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.2857 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HERC5-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HERC5-1:1
4.0 lnc-HERC5-1:1
4.1 lnc-HERC5-1:1
5.0 lnc-HERC5-1:1
5.1 lnc-HERC5-1:1
5.2 lnc-HERC5-1:1