Transcript: lnc-HERC5-1:5

Basic information

LNCipedia transcript ID: lnc-HERC5-1:5 
LNCipedia gene ID: lnc-HERC5-1
RefSeq ID: NR_134663
Location (hg38): chr4:88523810-88524991
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 350 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134663.1
Alternative gene names: LOC101929134


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.2857 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HERC5-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-HERC5-1:5
5.1 lnc-HERC5-1:5
5.2 lnc-HERC5-1:5