Transcript: lnc-HERC5-1:7

Basic information

LNCipedia transcript ID: lnc-HERC5-1:7 
LNCipedia gene ID: lnc-HERC5-1
Ensembl Gene ID: ENSG00000285122
Ensembl Transcript ID: ENST00000597259
Location (hg38): chr4:88523856-88524913
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 235 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000597259.2
Alternative gene names: ENSG00000285122.1; AC083829.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 4.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HERC5-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-HERC5-1:7
5.1 lnc-HERC5-1:7
5.2 lnc-HERC5-1:7