Transcript: lnc-HFM1-4:1

Basic information

LNCipedia transcript ID: lnc-HFM1-4:1 
LNCipedia gene ID: lnc-HFM1-4
Location (hg38): chr1:91501450-91569922
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1171 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066419.1|MICT00000015072.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.792 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HFM1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HFM1-4:1
5.0 lnc-HFM1-4:1
5.1 lnc-TGFBR3-4:1
5.2 lnc-HFM1-4:1