Transcript: lnc-HGF-1:4

Basic information

LNCipedia transcript ID: lnc-HGF-1:4 
LNCipedia gene ID: lnc-HGF-1
RefSeq ID: NR_126025
Location (hg38): chr7:81576386-81691406
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4650 bp
Exons: 11
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126025; NR_126025.1
Alternative gene names: LOC100128317


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.2907 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HGF-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HGF-1:4
4.0 lnc-HGF-1:4
4.1 lnc-HGF-1:4
5.0 lnc-HGF-1:4
5.1 lnc-HGF-1:4
5.2 lnc-HGF-1:4