Transcript: lnc-HHIPL1-1:6

Basic information

LNCipedia transcript ID: lnc-HHIPL1-1:6 
LNCipedia gene ID: lnc-HHIPL1-1
Location (hg38): chr14:99613936-99615643
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1708 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT039628; FPKM1_group_9559_transcript_5
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.2411 non-coding 
CPAT coding probability 2.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HHIPL1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HHIPL1-3:1
4.0 lnc-HHIPL1-3:1
4.1 lnc-HHIPL1-1:6
5.0 lnc-HHIPL1-1:6
5.1 lnc-HHIPL1-1:6
5.2 lnc-HHIPL1-1:6