Transcript: lnc-HHIPL1-2:1

Basic information

LNCipedia transcript ID: lnc-HHIPL1-2:1 
LNCipedia gene ID: lnc-HHIPL1-2
Ensembl Gene ID: ENSG00000258749
Ensembl Transcript ID: ENST00000557733
Location (hg38): chr14:99512501-99513576
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 889 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557733.1; RP11-688G15.3-001; OTTHUMT00000413809.1; NONHSAT039622
Alternative gene names: ENSG00000258749.1; RP11-688G15.3; OTTHUMG00000171507.1; AL110504.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.2303 non-coding 
CPAT coding probability 2.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HHIPL1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HHIPL1-2:1
4.0 lnc-HHIPL1-2:1
4.1 lnc-HHIPL1-2:1
5.0 lnc-HHIPL1-2:1
5.1 lnc-HHIPL1-6:1
5.2 lnc-HHIPL1-2:1