Transcript: lnc-HHIPL2-1:5

Basic information

LNCipedia transcript ID: lnc-HHIPL2-1:5 
LNCipedia gene ID: lnc-HHIPL2-1
Location (hg38): chr1:222464571-222465462
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 892 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226643.1|ENCT00000038204.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -98.4081 non-coding 
CPAT coding probability 4.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HHIPL2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HHIPL2-1:5
5.0 lnc-HHIPL2-1:5
5.1 lnc-LEFTY2-58:4
5.2 lnc-HHIPL2-1:5