Transcript: lnc-HHLA2-7:1

Basic information

LNCipedia transcript ID: lnc-HHLA2-7:1 
LNCipedia gene ID: lnc-HHLA2-7
Location (hg38): chr3:108091172-108093013
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1842 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000061239.1|MICT00000247693.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.1578 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HHLA2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-631B21.2.1-7:1
5.0 lnc-RP11-631B21.2.1-7:1
5.1 lnc-TMEM45A-62:1
5.2 lnc-HHLA2-7:1