Transcript: lnc-HIST1H2AI-3:14

Basic information

LNCipedia transcript ID: lnc-HIST1H2AI-3:14 
LNCipedia gene ID: lnc-HIST1H2AI-3
Location (hg38): chr6:27694069-27717228
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8009 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083347.1|MICT00000299590.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.8934 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2AI-3:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HIST1H2AI-3:14
5.0 lnc-HIST1H2AI-3:14
5.1 lnc-OR2I1P-69:9
5.2 lnc-HIST1H2AI-3:14