Transcript: lnc-HIST1H2AI-3:4

Basic information

LNCipedia transcript ID: lnc-HIST1H2AI-3:4 
LNCipedia gene ID: lnc-HIST1H2AI-3
Location (hg38): chr6:27694079-27709156
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2770 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000446316
Alternative gene names: ENSG00000246046; AL009179.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.8741 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2AI-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HIST1H2AI-3:4
3.1 lnc-HIST1H2AI-3:4
4.0 lnc-HIST1H2AI-3:4
4.1 lnc-HIST1H2AI-3:4
5.0 lnc-HIST1H2AI-3:4
5.1 lnc-OR2I1P-69:14
5.2 lnc-HIST1H2AI-3:4