Transcript: lnc-HIST1H2AI-3:7

Basic information

LNCipedia transcript ID: lnc-HIST1H2AI-3:7 
LNCipedia gene ID: lnc-HIST1H2AI-3
RefSeq ID: NR_038294
Location (hg38): chr6:27694035-27710222
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 753 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108395; NR_038294; NR_038294.1
Alternative gene names: LINC01012


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.8934 non-coding 
CPAT coding probability 3.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2AI-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIST1H2AI-3:7
4.0 lnc-HIST1H2AI-3:7
4.1 lnc-HIST1H2AI-3:7
5.0 lnc-HIST1H2AI-3:7
5.1 lnc-OR2I1P-69:5
5.2 lnc-HIST1H2AI-3:7