Transcript: lnc-HIST1H2BJ-5:1

Basic information

LNCipedia transcript ID: lnc-HIST1H2BJ-5:1 
LNCipedia gene ID: lnc-HIST1H2BJ-5
Location (hg38): chr6:27100387-27128083
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 778 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3148_chr6:27068165-27095862_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.8034 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2BJ-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIST1H2BJ-5:1
4.0 lnc-HIST1H2BJ-5:1
4.1 lnc-HIST1H2BJ-5:1
5.0 lnc-HIST1H2BJ-5:1
5.1 lnc-C6orf62-64:1
5.2 lnc-HIST1H2BJ-5:1