Transcript: lnc-HIST1H4D-3:1

Basic information

LNCipedia transcript ID: lnc-HIST1H4D-3:1 
LNCipedia gene ID: lnc-HIST1H4D-3
Location (hg38): chr6:26156263-26156621
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 359 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000087830.1|FTMT22200002387.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 339.5308 coding 
CPAT coding probability 20.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HIST1H4D-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HIST1H4D-3:1
5.0 lnc-HIST1H4D-3:1
5.1 lnc-C6orf62-36:1
5.2 lnc-HIST1H4D-3:1