Transcript: lnc-HIST2H3C-1:1

Basic information

LNCipedia transcript ID: lnc-HIST2H3C-1:1 
LNCipedia gene ID: lnc-HIST2H3C-1
Location (hg38): chr1:149831312-149832545
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1234 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000577853.1; RP11-196G18.23-001; OTTHUMT00000444006.1; NONHSAT006252
Alternative gene names: ENSG00000264207.1; RP11-196G18.23; OTTHUMG00000178927.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.7644 non-coding 
CPAT coding probability 18.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST2H3C-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIST2H3C-1:1
4.0 lnc-HIST2H3C-1:1
4.1 lnc-HIST2H3C-1:1
5.0 lnc-HIST2H3C-1:1
5.1 lnc-HIST2H3C-1:1
5.2 lnc-HIST2H3C-1:1