Transcript: lnc-HIST4H4-1:3

Basic information

LNCipedia transcript ID: lnc-HIST4H4-1:3 
LNCipedia gene ID: lnc-HIST4H4-1
Ensembl Gene ID: ENSG00000261324
Ensembl Transcript ID: ENST00000562691
Location (hg38): chr12:14762504-14767931
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5428 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT027080; ENST00000562691.2
Alternative gene names: ENSG00000261324.2; RP11-174G6.5; AC010168.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.2924 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST4H4-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIST4H4-1:3
4.0 lnc-HIST4H4-1:3
4.1 lnc-HIST4H4-1:3
5.0 lnc-HIST4H4-1:3
5.1 lnc-WBP11-1:2
5.2 lnc-HIST4H4-1:3