Transcript: lnc-HLA-DRA-3:1

Basic information

LNCipedia transcript ID: lnc-HLA-DRA-3:1 
LNCipedia gene ID: lnc-HLA-DRA-3
Location (hg38): chr6:32413396-32415614
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 813 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT108905; FPKM1_group_27465_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -199.2669 non-coding 
CPAT coding probability 4.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HLA-DRA-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HLA-DRA-3:1
4.0 lnc-HLA-DRA-3:1
4.1 lnc-HLA-DRA-3:1
5.0 lnc-HLA-DRA-3:1
5.1 lnc-TNF-55:1
5.2 lnc-HLA-DRA-3:1