Transcript: lnc-HLX-2:6

Basic information

LNCipedia transcript ID: lnc-HLX-2:6 
LNCipedia gene ID: lnc-HLX-2
Location (hg38): chr1:220881684-220904007
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 577 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT009628
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.9893 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HLX-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HLX-2:6
4.0 lnc-HLX-2:6
4.1 lnc-HLX-2:6
5.0 lnc-HLX-2:6
5.1 lnc-CAPN2-45:6
5.2 lnc-HLX-2:6