Transcript: lnc-HLX-3:1

Basic information

LNCipedia transcript ID: lnc-HLX-3:1 
LNCipedia gene ID: lnc-HLX-3
Location (hg38): chr1:221094164-221119179
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 782 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_193_chr1:221267505-221292521_76bGuttman_hES
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.9481 non-coding 
CPAT coding probability 6.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HLX-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HLX-3:1
4.0 lnc-HLX-3:1
4.1 lnc-HLX-3:1
5.0 lnc-HLX-3:1
5.1 lnc-CAPN2-44:3
5.2 lnc-HLX-3:1